When applying the boron isotope proxy, paleoceanographers make use of the fact that higher atmospheric pCO2 causes seawater to acidify, i.e. its pH decreases, and lower atmospheric pCO2 turns seawater more alkaline, i.e. its pH increases. Boron chemistry in the ocean is sensitive to seawater acidity and this is recorded in the boron isotope composition of planktic foraminifera. So, by analyzing the boron isotopic composition of fossil planktic foraminifera, paleoceanographers can reconstruct ancient surface ocean acidity, and translate this information into atmospheric pCO2 if a second parameter of the marine carbonate system can be constrained - in addition to temperature, pressure and salinity. For a general background, see also note on General background and some commonalities of paleo-CO2 proxies.
In detail, the sensitivity of δ11B in marine carbonates is based on the chemical speciation of dissolved boron in seawater. Dissolved boron occurs in two forms, boric acid (B(OH)3) and borate ion (B(OH)4-), and their relative abundance depends on seawater acidity, where boric acid is more abundant at lower pH (i.e. more acidic water) and borate at higher pH (more alkaline seawater, see Figure a). There are also two isotopes of boron - 10B, which preferentially resides in borate ion, and 11B, which preferentially occurs in boric acid. When seawater pH increases, more and more boric acid is converted to borate ion (Figure a), and the 11B originally present in boric acid is transferred to borate ion as well. Consequently, the boron isotope ratio (11B/10B) of borate ion increases at higher pH, and decreases at lower pH (Figure b). Boron isotope analyses of marine carbonates have shown that they preferentially incorporate borate ion into their shells and skeletons, such that their 11B/10B ratio also increases when seawater pH is higher and decreases when seawater pH is lower (Figure b). Boron is thereby not an essential component of a calcium carbonate skeleton, but it is rather an impurity that replaces (i.e. substitutes) carbonate ion (CO32-) in the CaCO3 mineral lattice. As boron becomes a solid component of a CaCO3 shell, it remains locked into the shell after the carrier organism dies, and therefore can be recorded in the geologic archive if the fossil shell is preserved, e.g., in ocean sediments.
As an impurity, boron is not very abundant in marine carbonates, scientists consider it a trace element, but there is enough boron present to be analyzed. Scientists report the boron isotopic composition of marine carbonates as δ11B, which is the 11B/10B ratio of a carbonate sample relative to the 11B/10B ratio of a standard. Because the measured isotope differences are small and precise reporting of this ratio would require a cumbersome value with 4 decimal places (e.g., 11B/10Bsample/11B/10Bstandard =1.0204), scientists simplify this term by subtracting 1 and multiplying the ratio by 1000, i.e. δ11B = (11B/10Bsample/11B/10Bstandard -1) x1000. The unit of δ11B is ‰ (per mil or per thousand) and marine carbonate δ11B values typically range between 14 and 30‰, depending on the carbonate producer (e.g., foraminifera record lower δ11B than tropical corals, Figure b) and on the seawater pH under which the organisms grew.

Paleo-CO2 reconstruction from δ11B typically uses shells of symbiont-bearing planktic foraminifera, which live in nutrient-poor ocean regions such as subtropical gyres. Subtropical gyres are large rotating water masses centered around 30° latitude in the northern and southern hemisphere of all ocean basins. In subtropical gyres, seawater resides at the sea surface for a long time, which allows air-sea gas exchange to reach equilibrium (i.e. PCO2 = pCO2). Symbiont-bearing planktic foraminifera are bound to the surface ocean, where enough sunlight is available for the symbionts to photosynthesize (e.g., Henehan et al., 2013; Hönisch and Hemming, 2005). This fortunate coincidence of a surface ocean, low nutrient habitat makes them ideal targets for reconstructing atmospheric paleo-CO2 and alleviates some of the concerns that are central to, e.g., the phytoplankton δ13C proxy, which often needs to account for significant air-sea CO2 disequilibrium in ocean regions that are productive enough to allow sufficient phytoplankton to grow and produce their biomarkers.
However, like all proxies, the boron isotope proxy is also not free of challenges. Such challenges include the uncertainty introduced by foraminifera species-specific vital effects on recorded isotope ratios, the relatively poorly constrained boron isotopic composition of past seawater (which evolved through geologic time), the need for a second parameter of the marine carbonate system (e.g., alkalinity or the total concentration of dissolved inorganic carbon, DIC), for which scientists do not yet command a specific paleo-proxy, and potential diagenetic modification of the original proxy signal via partial dissolution of fossil foraminifera shells in the sediment. For more information on the boron isotope proxy, see Hönisch et al. (2019).
Boron isotope flow chart The figure above shows a simple flow chart of the different parameters required to calculate CO2 from this proxy. A template for entering new paleo-CO2 estimates from boron isotopes can be found here. For adding new data, please fill out the template and submit it to the paleo-CO2 database at the NOAA National Centers for Environmental Information (formerly known as the National Climatic Data Center, NCDC), using email address paleo@noaa.gov.
The B/Ca ratio in planktic foraminifera shells has also been considered as a paleo-CO2 proxy. This proxy is based on the same principle as the boron isotope proxy, but it focuses on the dissolved concentration (rather than isotopic composition) of borate ion in seawater. As borate ion becomes more dominant at higher pH (Figure b), planktic foraminifera incorporate more boron into their shells, and this can be measured in their B/Ca ratio. This theoretical basis of the proxy has been confirmed in laboratory culture experiments with planktic foraminifera grown across a range of seawater-pH (Allen et al., 2012), but Pleistocene sediment studies have struggled to observe the expected higher B/Ca ratios during glacial times when pCO2 was lower and surface ocean pH consequently higher. A few seemingly successful reconstructions of Pleistocene paleo-CO2 from planktic B/Ca (Foster, 2008; Tripati et al., 2009; Yu et al., 2007) applied either a temperature or a carbonate ion correction on the empirical boron partition coefficient between foraminiferal B/Ca and the ratio of dissolved borate to bicarbonate in seawater, i.e. KD = B/Ca / ([B(OH)4-]/[HCO3-]). However, this practice of correcting KD for temperature or carbonate ion was later found to be based on artificial correlations that produce erroneous results (Allen and Hönisch, 2012). The application of KD in B/Ca has henceforth been relinquished and published paleo-CO2 estimates from planktic B/Ca and KD are considered unreliable. Pleistocene glacial/interglacial pH shifts appear too small to be detected with foraminiferal B/Ca. Additional evidence from culture experiments suggests that the pH-effect on B/Ca can be modified by variable concentrations of total dissolved inorganic carbon (DIC) in seawater (Allen et al., 2012), possibly opening the door to more refined B/Ca – carbonate chemistry translations in the future.
A template for entering new paleo-CO2 estimates from B/Ca can be found here. For adding new data, please fill out the template and submit it to the paleo-CO2 database at the NOAA National Centers for Environmental Information (formerly known as the National Climatic Data Center, NCDC), using email address paleo@noaa.gov.
Allen, K.A. and Hönisch, B. (2012) The planktic foraminiferal B/Ca proxy for seawater carbonate chemistry: A critical evaluation. Earth and Planetary Science Letters 345-348, 203-211.
Allen, K.A., Hönisch, B., Eggins, S.M. and Rosenthal, Y. (2012) Environmental controls on B/Ca in calcite tests of the tropical planktic foraminifer species Globigerinoides ruber and Globigerinoides sacculifer. Earth and Planetary Science Letters 351-352, 270-280.
Foster, G.L. (2008) Seawater pH, pCO2 and [CO32-] variations in the Caribbean Sea over the last 130kyr: A boron isotope and B/Ca study of planktic foraminifera. Earth and Planetary Science Letters 271, 254-266.
Henehan, M.J., Rae, J.W.B., Foster, G.L., Erez, J., Prentice, K.C., Kucera, M., Bostock, H.C., Martínez-Botí, M.A., Milton, J.A., Wilson, P.A., Marshall, B.J. and Elliott, T. (2013) Calibration of the boron isotope proxy in the planktonic foraminifera Globigerinoides ruber for use in palaeo-CO2 reconstruction. Earth and Planetary Science Letters 364, 111-122.
Hönisch, B., Eggins, S.M., Haynes, L.L., Allen, K.A., Holland, K. and Lorbacher, K. (2019) Boron proxies in Paleoceanography and Paleoclimatology. John Wiley & Sons, Ltd.
Hönisch, B. and Hemming, N.G. (2005) Surface ocean pH response to variations in pCO2 through two full glacial cycles. Earth and Planetary Science Letters 236, 305-314.
Tripati, A.K., Roberts, C.D. and Eagle, R.A. (2009) Coupling of CO2 and Ice Sheet Stability Over Major Climate Transitions of the Last 20 Million Years. Science, 1178296.
Yu, J., Elderfield, H. and Hönisch, B. (2007) B/Ca in planktonic foraminifera as a proxy for surface seawater pH. Paleoceanography 22.